Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEYQGVNTVKKDRKPITITANAVERIRYLLDQKQYTNLERSEEAIGIRVLIKQKGCSGLKYDIEYAYDIHPLESVIEESCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
2APN Chain:A ((2-114))
---------IDDMAVPLTFTDAAANKVKSLISEEE-------NTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEK-----SGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
General information:
TITO was launched using:
RESULT:
Template:
2APN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24337 for 808 contacts (-30.1/contact) +
2D Compatibility (PS) -12126 + (NN) -3818 + (LL) 656
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -51375.0 ( -63.58 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_2APN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APN-query.scw
PDB file :
Tito_Scwrl_2APN.pdb
: