Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSLVLVYTTFSNVKEAKAVSEELLNKKLIICVNIFPKVNSLYLWKGEINSSCEVIAIMKSRSDQVDKIVEKVEAMHSYDQPAIVIIPIEKVNKSFANWVNSVIDVSSIGV
1KR4 Chain:A ((8-106))
----ILVYSTFPNEEKALEIGRKLLEKRLIACFNAF-EIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENILTEYMNWLRESVLGS----
General information:
TITO was launched using:
RESULT:
Template:
1KR4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57931 for 626 contacts (-92.5/contact) +
2D Compatibility (PS) -10964 + (NN) -4122 + (LL) 428
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -84339.0 ( -134.73 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1KR4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KR4-query.scw
PDB file :
Tito_Scwrl_1KR4.pdb
: