Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKVLSIFACFLISFSSYANMFDWGTRKVSDTNTYVCNCNQGLADLVEELIPAVVNISSEQIIKQENNNRTKTPSFAPRNNFFDDFREFFEHFDQFFTDRNPSINREVVLLGSGFIID-KSGTIVTNYHVIKNAQDITVTMNDNTYFKAEVLGYDARTDLAVLKIKADKDLSFVTFSNSDKARVGDTVMAIGNPFGLGG-----SVSTGIISARSR-DISIGTTSEFIQTDAAINRGNSGGPLFDLNGKVIGINTAIYSPSESGGNVGIGFAIPSNLAISIIDTLKSGKKIKHGWLGVQVQPITREFAESLGL-KDVKGALVANIVKDSPAEKGGIKVGDILLEFDGKKIDRMTQLPQMVSRTEPGKKVQIKLLRKGKEVNVKVVIEESVNDSKDSNTEENRSISDYITGLTVSNLPKEPKESKNDTPIKGVIVTNVDSNSNATLRGIKKGDIIIQLDGVDIENTENFQKQVDLAIKKSGKDSIMLLIYRNGNQFFTSIKLKK |
| 4YNN Chain:A ((22-447)) | -------------------------------------------LAPVLKNAMPAIVNVAVQGY---------------------------------------------FESIGSGVIIDPKNGIIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKIDA-KNLKSLVIGDSDKLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVENFIQTDAAINPGNAGGALVNAKGELIGINTAIISP--YGGNVGIGFAIPINMAKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQSMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQATQVKTTISLLRAGSTAKIKILRDNKPLTLDV----EVTDIK-KHEQKLQSNNPFLYGLALRNFEQESPPHGNVVGVQVVGASETSAGWRA---GLRPGDIIISANKTPVKDIKSLQ-----AVAHEKGKQLLVQVLRGAGALYLLII--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195562 for 3221 contacts (-60.7/contact) +
2D Compatibility (PS) -42610 + (NN) -12152 + (LL) 6180
1D Compatibility (HY) -33600 + (ID) 7850
Total energy: -285594.0 ( -88.67 by residue)
QMean score : 0.510
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