Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MQDAEAKL-----KVKLSKRYIPPGNPGGTNFYEDE----DFAESYKLYEKRRELLKKKKLQDQTNININKEKLAKK-LKEKKIANLDSELSDTEACVINDEEDAMVNQHGINIARLKGAIFIDQGPISQREDEQHESERQEGKKATLT--REKKVSPINVTIKDTRSKRTCSH-DSIVDLNNVSSNGSDSFGSAADAVN----------------------------------- |
| 3FMG Chain:A ((28-262)) | TSTLCLYYPTEAATEINDNSWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQ----LDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQ---TLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVT-TATCTIRNCKKLGPRENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 92415 for 1134 contacts (81.5/contact) +
2D Compatibility (PS) -18163 + (NN) -2202 + (LL) 840
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: 65040.0 ( 57.35 by residue)
QMean score : 0.127
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