Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
1O6B Chain:A ((4-161))
------IAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIP-NITVETSQGLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVELALQQKFRQGGS
General information:
TITO was launched using:
RESULT:
Template:
1O6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106416 for 1217 contacts (-87.4/contact) +
2D Compatibility (PS) -16858 + (NN) -6907 + (LL) 476
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -146205.0 ( -120.14 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1O6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O6B-query.scw
PDB file :
Tito_Scwrl_1O6B.pdb
: