Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
1WQG Chain:A ((2-183))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
General information:
TITO was launched using:
RESULT:
Template:
1WQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96495 for 1310 contacts (-73.7/contact) +
2D Compatibility (PS) -20038 + (NN) -6318 + (LL) 208
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -135143.0 ( -103.16 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_1WQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQG-query.scw
PDB file :
Tito_Scwrl_1WQG.pdb
: