Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDIRLFRNE--PDTVKSKIELRGDDPKVVDEILELDEQRRKLISATEEMKARRNKVS------------EEIALKKRNKENADDVIAEMRTLGDDIKEKDSQL----NEIDNKMTGILCRIPNLISDDVPQGESDE-DNVEVKKWGTPREFSFEPKAHWDIVEELKMADFDRAA-KVSGARFVYLTNEGAQLERALMNYMITKHTTQHGYTEMMVPQLVNADTMYGTGQLPKFEEDLFKVEKEG--LYTIPTAEVPLTNFYRNEIIQPGVLPEKFTGQSACFRSEAGSAGRDTRGLIRLHQFDKVEMVRFEQP--EDSWNALEEMTTNAEAILEELGLPYRRVILCTGDIGFSASKTYDIEVWLPSYNDYKEISSCSNCTDFQARRANIRFK---RDKAAK--PELAHTLNGSGLAVGRTFAAIVENYQNEDGTVTIPEALVPFMGGKTQISKPVK |
| 3LSS Chain:A ((7-463)) | VLDIQLFRDETGANIIRESQRRRFADPDIVDAIIEADKKWRRTQFLTEASKKLINICSKAVGAKKKAKEA---------------CVLQLKQLSKDLSDQVAGLAKEAQQLEEERDKLMLNVGNILHESVPIAQDEETGNTVVRTFGNTTKRA--KLNHVSIMERLGMMDTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSL-DFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGDGDKKYLIATSEMPIAAYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLPYRVVNICSGALNNAAAKKYDLEAWFPASGAFRELVSCSNCTDYQSQSVNCRYGPNLR----QNVKEYCHMLNGTLCAITRTMCCICENYQTEEG-VVIPDVLRPYMMG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86627 for 3222 contacts (-26.9/contact) +
2D Compatibility (PS) -42326 + (NN) -17402 + (LL) 2168
1D Compatibility (HY) -31600 + (ID) 7350
Total energy: -183137.0 ( -56.84 by residue)
QMean score : 0.430
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