Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLKQLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEALKAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ
1CQU Chain:A ((1-53))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQK-----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18716 for 345 contacts (-54.2/contact) +
2D Compatibility (PS) -5539 + (NN) -1451 + (LL) 6768
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -25988.0 ( -75.33 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_1CQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CQU-query.scw
PDB file :
Tito_Scwrl_1CQU.pdb
: