Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLNTIESQFDKVAEDYDFVNEL--------LNDYSFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDEVVGIDISNQMLDLAKSKRQLTNTVYLNMNAEQLNFNEKFDFIVSRTTFHHLDDIASVIQQMKELLNEEGRIVILDNVSEVETPPTYVYKLGAIQEFLPHCFKFGIKNAIRIYNHNTSKSWLEHLASDKYLSEQNYYDLYEKLLPGCQFHKMGWAMGVVWTK |
4OQD Chain:A ((17-115)) | -----------EIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIA--RRRNPDAVLHHGDMRDFSLGRRFSAVT---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47471 for 639 contacts (-74.3/contact) +
2D Compatibility (PS) -9721 + (NN) -4706 + (LL) 9636
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -59162.0 ( -92.59 by residue)
QMean score : 0.680
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