Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MEDLKESLKSLGWWDLFFAIPMFLLFAYLPNY--NFITIFLNIV---IIIFFSIGLILTTHIIIDKIKSNTK--
4R80 Chain:A ((2-77))
PSEEEEKRRAKQVAKEKILEQNPSSKVQVRRVQKQGNTIRVELEITENGKKTNITVEVEKQGNTFTVKRITETVGS
General information:
TITO was launched using:
RESULT:
Template:
4R80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61541 for 437 contacts (-140.8/contact) +
2D Compatibility (PS) -7757 + (NN) -3093 + (LL) 0
1D Compatibility (HY) 5600 + (ID) 500
Total energy: -67291.0 ( -153.98 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_4R80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R80-query.scw
PDB file :
Tito_Scwrl_4R80.pdb
: