Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MMIGSSFIPLQRVLM------YFINPNDSMDQFTLEVLRLPRITL-------AILAG----------------AALGMSGLML----QNVLKNPIASPDIIGITG--GASLSAVV-FIAFFSHLTIHLL------PLFAVLGGAVAMMILL--VFQTKGQIRP--TILIIIGISMQTL-----FIALVQGLLITTK------------------QLSAAKAYTWLVGSLYGATFKDTIILG---------------MVILAVVPLL-F-LVIPKMKISILDDPVAIGLG-LHVQRMKLIQLI-----TSTILVSMAISLVGNIGFV--GLIAPHIAKTIVRGSYAKKLLMSAM-IGAISIVIADLIGR----------TLFLPK-EVPAG--VFIAAFGAPFFIYLLLTVKKL------- |
| 4BUC Chain:A ((16-448)) | PRGSHMKIGFLGFGKSNRSLLKYLLNHQEAKFFVSEAKTLDGETKKFLEEHSVEYEEGGHTEKLLDCDVVYVSPGIKPDTSMIELLSSRGVKLSTELQFFLDN-VDPKKVVGITGTDGKSTATALMYHVLSGRGFKTFLGGNFGTPAVEALEGEYDYYVLEMSSFQLFWSERPYLSNFLVLNISEDHLDWHSSFKEYVDSKLKPAFLQTEGDLFVYNKHIERLRNLEGVRSRKIPFWTDENFATEKELIVRGKKYTLPGNYPYQMRENILAVSVLYMEMFNELESFLELLRDFKPLPHRMEYLGQIDGRHFYNDSKATSTHAVLGALSNFDKVVLIMCGIGKKENYSLFVEKASPK--LKHLIMFGEISKELAPFVGKIPHSIVENMEEAFEKAMEVSEKGDVILLSPGGASFAKRGEHFREIFKRHGGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314529 for 1992 contacts (-157.9/contact) +
2D Compatibility (PS) -32049 + (NN) -9563 + (LL) 100
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -372141.0 ( -186.82 by residue)
QMean score : 0.161
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