Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIEQLDARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQN-LIAAIEILKLHNS-NHAHFTFIGDG-PTLNDCQQQVVQAGLENDVTFLGNVINASHLLSQY---DTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVA-DNGICMMNNQPETIAKVLEKY--LIDSDYIKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 2BIS Chain:A ((255-430)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM-SFSWEKSAERYVKAYTG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118656 for 1235 contacts (-96.1/contact) +
2D Compatibility (PS) -18457 + (NN) -5555 + (LL) 16664
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -139604.0 ( -113.04 by residue)
QMean score : 0.510
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