Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
2X26 Chain:A ((89-160)) | ----------------------------------------------------------------------------------------------------------------------------------------------------ILVAENSPIKTVADLKGHKVAFQKGSSS--HNLLLRALR-QAGLKFT-DIQPTYLTPAD-ARAAFQQGNVDAWAIWD--------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -48644 for 497 contacts (-97.9/contact) +
2D Compatibility (PS) -7619 + (NN) 535 + (LL) 15412
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -45666.0 ( -91.88 by residue)
QMean score : 0.637
|
|
|