Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
2K1K Chain:A ((548-569)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVAVIFGLLLGAALLLGILVFR----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11552 for 85 contacts (-135.9/contact) +
2D Compatibility (PS) -2300 + (NN) -965 + (LL) 15476
1D Compatibility (HY) -4000 + (ID) 300
Total energy: -3641.0 ( -42.84 by residue)
QMean score : 0.855
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