Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNI-V-Q-DPRVLKQIETIKGVTNDYKIVGMNNSQATNRR----LENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLL---MVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREF----KEI--ENFKEIVYQGQIVMDRGYEEFIIASSAFKQ--NAPSFIIRGFGPHE-------EVIKELIS-YNSENIRLDKP-------VEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKE------------------VTPLEIEKAVRKLRDNHDLFNHLRQNAIK-ASKILNWQIESERLVELYKF |
| 3OY2 Chain:A ((1-388)) | MKLIIVGAHSSVPSGYGRVMRAIVPRISK-AHEVIVFGIHAFGRSVHANIEEFDAQTA-EHVRG----LN---EQGF----YYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRE--------NL-W--WIFSHP-KVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNC------SSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGD-CVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFF-KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103664 for 2669 contacts (-38.8/contact) +
2D Compatibility (PS) -35617 + (NN) -7854 + (LL) 2676
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -155759.0 ( -58.36 by residue)
QMean score : 0.375
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