Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFVSILLISILIESIAL---IIVF---LYFFNLNTIDIIFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLYYLIQNWIVCFITS-ELFATIYTLVKLRGLTIGEYQSEDNNVVKDYVMLLSTNSLNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNIKKQYLKTNLFAIAALCLVMIICYPI---TLIIVSLLYNIDSSLYSKFIIL---GNIGVLFNAVSIMIQTLNTKHASITL---QANYMTLHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD |
| 4BZF Chain:A ((1-322)) | -----ANFIEKITYLGTPAIKAGNEHLEMIVVPE------WGS-----NVISLVD-----KTTNVQLLREP--ETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFDINEKD-------------------------KHNHL-------------HGFLYH--EKWNVVTTKQTDEGVIVETEIDLSELPHVQKQ------FPHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFI--------FPAESSLFSL-TADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQF------KHWVVYNADGKQGYLCPEPYTWVTNAVNLDLPSSLTGL---QVLEPGEETTAKSSITIELN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -382339 for 2554 contacts (-149.7/contact) +
2D Compatibility (PS) -31742 + (NN) 11875 + (LL) 10300
1D Compatibility (HY) -5200 + (ID) 2650
Total energy: -399756.0 ( -156.52 by residue)
QMean score : 0.095
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