Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVSTTPEA---SDVFIIAVPTPNND---DQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIE-----NLGFTIGEDICLVHCPERVLPGKILEELVHNNRI-IGG----VTKACIEAGKYVYRTFVQGEMI-ETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVD----PYFIIAKD-PENAKLIQTGREINN----SMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELDFVEHDMSH---------------AVKDASLVLILSDHSEFKNLSDSHFDK--MKHKVIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 3TDK Chain:A ((6-445)) | -KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQN-SNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQV------LSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDS---LFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDE-GAHLHIYDPKVPREQIVVDLSHDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVL--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216886 for 3123 contacts (-69.4/contact) +
2D Compatibility (PS) -41402 + (NN) -8923 + (LL) 1628
1D Compatibility (HY) -24800 + (ID) 5350
Total energy: -295733.0 ( -94.70 by residue)
QMean score : 0.484
|
|
|