Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT
2WSC Chain:D ((153-176))
------------------------KYQFYRVFPSGEVQYLH---PKDGVYP----------------
General information:
TITO was launched using:
RESULT:
Template:
2WSC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 634 for 99 contacts (6.4/contact) +
2D Compatibility (PS) -2281 + (NN) 1053 + (LL) 3552
1D Compatibility (HY) 1200 + (ID) 50
Total energy: 4108.0 ( 41.49 by residue)
QMean score : -0.045
(partial model without unconserved sides chains):
PDB file :
Tito_2WSC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WSC-query.scw
PDB file :
Tito_Scwrl_2WSC.pdb
: