Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAILFMYYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI
1FW5 Chain:A ((1-20))
----------------------------------------------------GSTLYTESRKLLRSWHLPSV---------------------
General information:
TITO was launched using:
RESULT:
Template:
1FW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4154 for 74 contacts (56.1/contact) +
2D Compatibility (PS) -2051 + (NN) 95 + (LL) 8812
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 9260.0 ( 125.14 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_1FW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FW5-query.scw
PDB file :
Tito_Scwrl_1FW5.pdb
: