Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQNRDSMYASFDGKIMIKNIDN----DSDNQPILYLISK-ESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
2DNC Chain:A ((19-98)) | -----------------------------------------------------------------MEEGNIVKWLKKEGEAVSAGDALCEIETDKA---------------------------------------------------------VVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEGEDWKHVSGPSSG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6368 for 440 contacts (-14.5/contact) +
2D Compatibility (PS) -7948 + (NN) -1538 + (LL) 19344
1D Compatibility (HY) -800 + (ID) 650
Total energy: 2040.0 ( 4.64 by residue)
QMean score : 0.341
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