Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------MLKLHKKIAWTGIKGSAITTFITALYNGSSVW--NALAVAGIAFGGGAGTAVAALGRATVMRFIKRWGVRKTAAW-----------
4WLP Chain:B ((1-114))
EDLLEDPEIFFDVVSLSTWQEVLSDSQREHLQQFLPQ--FPEDSAEQQNELILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLNSQQQYFHRLLKQILAS
General information:
TITO was launched using:
RESULT:
Template:
4WLP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10528 for 321 contacts (-32.8/contact) +
2D Compatibility (PS) -7807 + (NN) -4814 + (LL) 348
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -25301.0 ( -78.82 by residue)
QMean score : 0.011
(partial model without unconserved sides chains):
PDB file :
Tito_4WLP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WLP-query.scw
PDB file :
Tito_Scwrl_4WLP.pdb
: