Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MGCLVYYLLNIDLGKMIVAQDLNLQEIFFHNLIYFFSAIFGFLTLGLLNIGMLLINSGMLGFFIAHGIYSNQLKSILLVLAPHAIFEILALLIASTFSLGFLSYLYQRMVKKNKIKNKMFHNFVT----TIITVIVLTIIASLLEVYVTIN
1XI0 Chain:A ((3-145))
MSYSITLRVYQTNRDRGYF----SIVEKTVWHFANGGTWSEANGAHTLTQGGSGT----SGVLRFLSTKG---ERITVAVGVHNYKRWCDVVTGLKPDETALVINPQYYNNGGRDYVREKQLAEYSVTSAIGTKVEVVYTVAEGNNLEANVIFS
General information:
TITO was launched using:
RESULT:
Template:
1XI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170215 for 1068 contacts (-159.4/contact) +
2D Compatibility (PS) -14705 + (NN) 7510 + (LL) 1404
1D Compatibility (HY) 3200 + (ID) 1300
Total energy: -174106.0 ( -163.02 by residue)
QMean score : 0.178
(partial model without unconserved sides chains):
PDB file :
Tito_1XI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI0-query.scw
PDB file :
Tito_Scwrl_1XI0.pdb
: