Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAIL-NFGKVYGPSPMTLHSPIEHVVI---------------AMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGD--HFGRPVN----QIVYEHLAGRIPLIASGGINSPESALDALQHA--DMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 4JIC Chain:A ((13-346)) | ----------------IALANRIVMAPLTRNRSP--GAIPNNLNATYYEQRATAGLIVTEGTPISQQGQGYADVPGLYKREAIEGWKKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPSAITAKS--KTYIINDDGTGAFAETSEPRALTIDDIGLILEDYRSGARAALEAGFDGVEIHAANGYLIEQFLKSSTNQRTDDYGG-SIENRARFLLEVVDAVAEEIGAGR-----TGIRLSP-VTPANDI-FEADP-QPLYNYVVEQLGKRNLAFI----HVVEGATGGPRDFKQGDKPFDYASFKAAYRNAGGKGLWIANNGYDR-QSAIEAVESGKVDAVAFGKAFIANPDLVRRLKNDAP------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194139 for 2735 contacts (-71.0/contact) +
2D Compatibility (PS) -33292 + (NN) -13459 + (LL) 4772
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -258168.0 ( -94.39 by residue)
QMean score : 0.414
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