Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVNLIMTKERRTFSSEFKLQMVRLY-KNG-------KLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
2RN7 Chain:A ((3-97))
-----------KNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPERENRELRRSNDILRLASAYF
General information:
TITO was launched using:
RESULT:
Template:
2RN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13457 for 381 contacts (-35.3/contact) +
2D Compatibility (PS) -8647 + (NN) 117 + (LL) 1344
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -22593.0 ( -59.30 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2RN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RN7-query.scw
PDB file :
Tito_Scwrl_2RN7.pdb
: