Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNYGIPQNAIITIAGTVGVGKSTLTQAL--------------ADKLNFKTS---FENVEHNPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEYGGGFVQD---------RSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPYFPKP---DVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWI---------NSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR |
4JLJ Chain:A ((44-279)) | -----------ISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSN----ELTMEQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASL---NGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWM--NNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-DFKDKYESL---VEKVKEFLST------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80614 for 1300 contacts (-62.0/contact) +
2D Compatibility (PS) -20351 + (NN) -5633 + (LL) 1724
1D Compatibility (HY) -13600 + (ID) 3050
Total energy: -121524.0 ( -93.48 by residue)
QMean score : 0.528
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