Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQSSKQQTPKIKKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSNNAETQVNQNITVTGYPG-DKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGG-VPNEFNG---AVFINENVRNFLKQNIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPDAA |
| 2VID Chain:A ((24-203)) | -------------------------------------------------------------------------------------------------------ATGFVVGKNTILTNKHVSKNYKVGD--RITAHP---NSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYA--AGAKAGERIKVIGYPHPYK--YVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFASDV---DNRNAYGVYFTPEIKKFIAENID--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51251 for 1257 contacts (-40.8/contact) +
2D Compatibility (PS) -17889 + (NN) -8114 + (LL) 1620
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -91334.0 ( -72.66 by residue)
QMean score : 0.448
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