Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKA----LNQLGQKCDVITYEFENISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSE--CVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPARIDKTAEAKEQVNKI-IQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLG-----KDLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
| 4M9U Chain:A ((3-345)) | -----------IGIIGAGQLARMLSLAGTPLGLEFHCLGKNGDC-----AEEVVKTVTDIELTKVNDVVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFMQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFENVVLAEKAQQIAKILVKEFAYVGTLAIEFFV-KGDELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTS--RKTVMLNCIGGMPATKDLAALD-------RVKIHSYNKEPRK-GRKVGHLNLNLND---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109144 for 2791 contacts (-39.1/contact) +
2D Compatibility (PS) -36759 + (NN) -16918 + (LL) 2120
1D Compatibility (HY) -28000 + (ID) 5850
Total energy: -194551.0 ( -69.71 by residue)
QMean score : 0.458
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