Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKGRLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLKQLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGSLIETYQIFLNKLEDLK
4O7W Chain:A ((7-225))
---VYEGKAKKMIPID-DDKLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGISLDE-IKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYK----------
General information:
TITO was launched using:
RESULT:
Template:
4O7W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47266 for 1660 contacts (-28.5/contact) +
2D Compatibility (PS) -23435 + (NN) -4248 + (LL) 1420
1D Compatibility (HY) -25600 + (ID) 5300
Total energy: -104429.0 ( -62.91 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_4O7W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7W-query.scw
PDB file :
Tito_Scwrl_4O7W.pdb
: