Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVD--FAVKLGLVDR--EDGKQIMLRLEKELSKLHEAFTLV
2HWK Chain:A ((86-116))
----------------------------------------------PNMYGLNKEVVRQLSRRYPQLPRAVATGRVY------------------
General information:
TITO was launched using:
RESULT:
Template:
2HWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1492 for 94 contacts (-15.9/contact) +
2D Compatibility (PS) -2813 + (NN) -1305 + (LL) 6244
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -2166.0 ( -23.04 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_2HWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HWK-query.scw
PDB file :
Tito_Scwrl_2HWK.pdb
: