Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR
1IUY Chain:A ((30-79))
-------------------------------------------------------------------------------------------------------------------AIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA
General information:
TITO was launched using:
RESULT:
Template:
1IUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10585 for 291 contacts (-36.4/contact) +
2D Compatibility (PS) -5559 + (NN) -1526 + (LL) 6728
1D Compatibility (HY) -4000 + (ID) 250
Total energy: -15192.0 ( -52.21 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1IUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUY-query.scw
PDB file :
Tito_Scwrl_1IUY.pdb
: