Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
3TZK Chain:A ((13-250))
----KVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
3TZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114803 for 2045 contacts (-56.1/contact) +
2D Compatibility (PS) -25510 + (NN) -4222 + (LL) 948
1D Compatibility (HY) -21200 + (ID) 6600
Total energy: -171387.0 ( -83.81 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3TZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZK-query.scw
PDB file :
Tito_Scwrl_3TZK.pdb
: