Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
3TGN Chain:B ((36-73))
----------------------LTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIK--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11309 for 221 contacts (-51.2/contact) +
2D Compatibility (PS) -4019 + (NN) -85 + (LL) 6076
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -12937.0 ( -58.54 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_3TGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TGN-query.scw
PDB file :
Tito_Scwrl_3TGN.pdb
: