Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
1QXO Chain:A ((240-268))
-------------------------------------DARLAQAVVSINAFKGVEFGLGFEAGYRK-----------------
General information:
TITO was launched using:
RESULT:
Template:
1QXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7816 for 118 contacts (-66.2/contact) +
2D Compatibility (PS) -2872 + (NN) 732 + (LL) 3372
1D Compatibility (HY) -1200 + (ID) 100
Total energy: -7884.0 ( -66.81 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1QXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QXO-query.scw
PDB file :
Tito_Scwrl_1QXO.pdb
: