Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYI--DQFDQSFILIDEHVNQ----YFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTIL-AHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVAD--EKEQGVRKFLNLGHTFGHAVEYNHK--IAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKN-----DKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
2GRU Chain:A ((17-342)) | --------------FGEH-VLESVESYIPRDEFDQYIMISDSGVPDSIVHYAAEYFGKLAP---VHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVAAGMMFRGIALIHVPTTFLAASDSVLSIKQAVNLTSGKNLVGFYYPPRFVFADTRILSESPPRQVKAGMCELVKNMLIL-ENDNKEFTEDDLNSANVYSPKQLETFINFCISAKMSVLSEDIYEKKKGL--IFEYGHTIGHAIELAEQGGITHGEAIAVGMIYAAKIANRMNLMPEHDVSAHYWLLNKIGALQDIPLKSDPDSIFHYLIHDNKRGYIKLDEDNLGMILLSGVG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210045 for 2626 contacts (-80.0/contact) +
2D Compatibility (PS) -32197 + (NN) -2295 + (LL) 2900
1D Compatibility (HY) -23600 + (ID) 5200
Total energy: -270437.0 ( -102.98 by residue)
QMean score : 0.433
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