Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
1S59 Chain:A ((5-153))
VEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE
General information:
TITO was launched using:
RESULT:
Template:
1S59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69907 for 1139 contacts (-61.4/contact) +
2D Compatibility (PS) -16175 + (NN) -5658 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -111190.0 ( -97.62 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1S59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S59-query.scw
PDB file :
Tito_Scwrl_1S59.pdb
: