Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
4AI5 Chain:B ((3-188))
MNECAFGTKDPVYLNFHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
General information:
TITO was launched using:
RESULT:
Template:
4AI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93833 for 1445 contacts (-64.9/contact) +
2D Compatibility (PS) -19905 + (NN) -10728 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 9250
Total energy: -159716.0 ( -110.53 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_4AI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AI5-query.scw
PDB file :
Tito_Scwrl_4AI5.pdb
: