Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPE---RDVPYVLDTIKLLTEEKL--NVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEK------HDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQ-LGVTKTLQGNLDPSILLAPWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR |
1R3W Chain:A ((15-362)) | ----KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLR--DPEVVASELGYVFQAIT-LTRQRLAGRVPLIGFAGAPWTLMTFMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD-FGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225063 for 2976 contacts (-75.6/contact) +
2D Compatibility (PS) -35860 + (NN) -12646 + (LL) 792
1D Compatibility (HY) -22800 + (ID) 6300
Total energy: -301877.0 ( -101.44 by residue)
QMean score : 0.552
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