Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKLVQMSVNELREE--GIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEIVTVNIKPAVD----QSVQSLKEAGIVLTD-----FQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADIAPIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGKPVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS |
| 3Q4G Chain:A ((8-278)) | -------IREEMRVLPSIDPQFEIERRVAFIKRKLTEARY-KSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDEAQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGAPEQLVYKTPTAD-------------LNLTYEQIDDFLEGKAVPAEVSQRLVAIYHATQHKRQPIPTIY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60268 for 1919 contacts (-31.4/contact) +
2D Compatibility (PS) -26818 + (NN) -10875 + (LL) 1268
1D Compatibility (HY) -17600 + (ID) 6650
Total energy: -120943.0 ( -63.02 by residue)
QMean score : 0.526
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