Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDD-AFDNVSINLDSTELRIKRGNQFRVKYDGDNDILINIVDKTLKISDKRSKTR-GYAIDMNPFHENKKTLTIEMPDKMIKRLNLSSGAGSVRISD-VDL-ENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSNIK-VVIG-----TLQIDKSQIKQSIFLNDHGDIEFK--NM-PSKVDAKASTKQGDIRFKYDSKPEDTILKLNPGT----GDSVVK-NKTFTNGKVGKSDN-VLEFYTIDGN---IKVE------- |
| 3ZX7 Chain:A ((5-300)) | AEGYEQIEVDVVAVWKEG-----YVYENRGSTSVDQKITITKGMK------NVNSETRTVTATHSIGSTISTGDAFEIGSVEVSYSHSHEESQVSMT-ETEVYESKVIEHTITIP-PTSKFTRWQLNADVGGADIEYMYLIDEVTPIGGTQSIPQVITSRAKIIVGRQIILGKTEIRIKHAERKEYMTVVSRKSWPAATLGHSKLFKFVLYEDWGGFRIKTLNTMYSGYEYAYSSDQGGIYFDQGTDNPKQRWAINKSLPLRHGDVVTFMNKYFTRSGLCYDDGPATNVYCLDKREDKWILEVVGLVPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32317 for 1821 contacts (17.7/contact) +
2D Compatibility (PS) -28478 + (NN) -4375 + (LL) 1404
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -9082.0 ( -4.99 by residue)
QMean score : 0.166
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