Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGAIWALVTIVMIAVITASITALLP
2Z8Y Chain:M ((449-501))
---VAKMKEEFPAIVDRVQ-VTIFTDEA---------KVKEYMEVAREKYKERDDRMRGLTDETVD----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z8Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3393 for 209 contacts (16.2/contact) +
2D Compatibility (PS) -5671 + (NN) -1226 + (LL) 7328
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -226.0 ( -1.08 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_2Z8Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z8Y-query.scw
PDB file :
Tito_Scwrl_2Z8Y.pdb
: