Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVLTQIYGGQQVSPNTEKLIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGNRIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP |
4Q9L Chain:A ((839-885)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13759 for 209 contacts (-65.8/contact) +
2D Compatibility (PS) -4795 + (NN) -499 + (LL) 20960
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -4493.0 ( -21.50 by residue)
QMean score : -0.024
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