Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK
1WPC Chain:A ((82-100))
---RSQLQAAVTSLKNNGIQVY-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1WPC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2748 for 69 contacts (-39.8/contact) +
2D Compatibility (PS) -2018 + (NN) -933 + (LL) 1792
1D Compatibility (HY) -800 + (ID) 200
Total energy: -4907.0 ( -71.12 by residue)
QMean score : 0.848
(partial model without unconserved sides chains):
PDB file :
Tito_1WPC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WPC-query.scw
PDB file :
Tito_Scwrl_1WPC.pdb
: