Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNIS--EVDAEVDLDGISES-TEKTVKINLPEHVTKA--QPSETKAYINVK |
2L3U Chain:A ((5-87)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YDLPIVLR---NLPEDLVLE-KPLPEVSVTIRAYPEILNNLTKEQISLWIDATGKAVGEHTVKIYWQLPAGIEMVSIPDVTYTLKAK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4041 for 405 contacts (10.0/contact) +
2D Compatibility (PS) -7806 + (NN) 4623 + (LL) 15244
1D Compatibility (HY) -4000 + (ID) 550
Total energy: 11552.0 ( 28.52 by residue)
QMean score : 0.581
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