Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDF-NNNTLTIQATRSAKY--KSEQLILDERNFESLMRQFDF-EAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
2H50 Chain:A ((50-136))
-----------------------------------------ETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPK----------------
General information:
TITO was launched using:
RESULT:
Template:
2H50.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43827 for 463 contacts (-94.7/contact) +
2D Compatibility (PS) -8748 + (NN) 1045 + (LL) 1896
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -56184.0 ( -121.35 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2H50.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H50-query.scw
PDB file :
Tito_Scwrl_2H50.pdb
: