Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKD--SNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFV-TPNG-----QVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDK------SEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| 4I0N Chain:A ((20-286)) | --------------------------------------GKEAIKYTSSDTASHKGWKATLSGTFIEDPHSDKKTALLNLEGFIPSDKQIFGSK---YYGKMKWPETYRINVKSADVNNNIKIANSIPKNTIDKKDVSNSIGYSIGGNISV-----------VQNTISYEQPDFRTIQRKDDANLASWDIK---FVETKDGYNIDSYHAIYGNQLFMKSRLYNNGDKNFTDDRDLSTLISGGFSPNMALALTAPKNAKESVIIVEYQRFDNDYILNWETT-QWRGTNKLSSTSEYNEF-------MFKINWQDHKIE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29734 for 1855 contacts (-16.0/contact) +
2D Compatibility (PS) -24782 + (NN) -3895 + (LL) 3872
1D Compatibility (HY) -13200 + (ID) 3550
Total energy: -71289.0 ( -38.43 by residue)
QMean score : 0.393
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