Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKY----FMDY----------HPIFKTLLGVVVAIQFTVPALIG----ALVAMKFDLSPLAIAVVASA---AYVGSGAAQ-----------FKNGAWMITGIGDLINTMITAAIAVLFILLIQH-----RV-GSMAL-------IVFPTVVGG-ISGAIGVL-ILPYTKMITTAIGNMV-NGFTE-LQPIVMSILISMVFSLIIISPLSTVAI--AFA----IG------------IT--GL-A----AGSASIGISATEAVLII----GTS----KVNRLGVPLSV--FFGGVKMMIPNMVKY-P---ILMLPILTTAIVSGLVSALVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG |
| 3QNQ Chain:A ((14-421)) | --------GKVAEQRHLLAIR-DGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVT-FGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAA-VTWTTPILFSGYLG-------SGGKISGVILQLVNFALAFVIYLPFLKI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270813 for 2382 contacts (-113.7/contact) +
2D Compatibility (PS) -32363 + (NN) -1502 + (LL) 3016
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -313162.0 ( -131.47 by residue)
QMean score : 0.106
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