Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYFGVRYSATTIAKDLKELNIYRVPIDCETWIYKAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSPGFAQGINYFIDQLNIEEILGTVSGNDTTLILTASNDMAEYVYAKLFK
2P5K Chain:A ((2-62))
-NKGQRHIKIREIITSNEIETQDELVDMLKQ-DGYKVTQATVSRDIKELHLVKVPTNNGSYKY--------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P5K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39322 for 376 contacts (-104.6/contact) +
2D Compatibility (PS) -6668 + (NN) -1059 + (LL) 6620
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -45479.0 ( -120.95 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2P5K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5K-query.scw
PDB file :
Tito_Scwrl_2P5K.pdb
: