Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAI---KGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
2F82 Chain:A ((327-447)) | ------------------------------------------------------MYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEV-DSLYRRF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10305 for 587 contacts (-17.6/contact) +
2D Compatibility (PS) -12332 + (NN) 2514 + (LL) 7324
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -20849.0 ( -35.52 by residue)
QMean score : 0.167
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