Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLFKQKF-----CESLPKSFSKTLLALSLGLILLGV----FI-PFPKVPKHQSVPLALHFTEHYARF---------IPTILSVAIPLI--------QRDAVGLFQV-ANASIATTFLTHATKRALNHVTIN---DQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
| 1QUP Chain:A ((1-221)) | TTNDTYEATYAIPMHCENCVNDIKACLKNVP-GINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86525 for 1378 contacts (-62.8/contact) +
2D Compatibility (PS) -19380 + (NN) 6872 + (LL) 176
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -98807.0 ( -71.70 by residue)
QMean score : 0.078
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