Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------MIKFVRNVVLFILTAIFLAFMLLVSYCMPHYSVAVISGVEVKRMNENENTPNNKEVKTLARDVYFVQTYDPKDQKSVTVYRNED--TRFGFPFYFKF-NSADISAL-AQSLVNQQVEVQYYGWRINLFNMFPNVIFLKPLKESDEMSKPVFSWI-LYALLLVGFFISARSVCTLFKGKAH-------------------------------------------------------------------------------------------------------------- |
| 4NOM Chain:A ((26-432)) | EDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDDLHVKDLNKTIRYMYE--HKMYQKMVFYIEACESGSM--------MNHLPDDIN----------VYATTAANPKES-SYACYYDEERGTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTSHVMQYGNKSISTMKVMQFQGMKHRASSPISLPPVTHLDLTPSPDVPLTILKRKLLRTNDVKESQNLIGQIQQFLDARHVIEKSVHKIVSLLAGFGETAERHLSERTMLTAHDCYQEAVTHFRTHCFNWHSVTYEHALRYLYVLANLCEAPYPIDRIEMAMDKVCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66951 for 1097 contacts (-61.0/contact) +
2D Compatibility (PS) -15983 + (NN) -3166 + (LL) 1808
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -87792.0 ( -80.03 by residue)
QMean score : 0.187
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